Here is a list of all class members with links to the classes they belong to:
- G
: glotzsimapi::type
- Ga
: glotzsimapi::atom
- gAnnealingModule
: glotzannealing::ThermalCycle
- gBaseObject
: glotzmd::Simulation
- gBead
: glotzmc::McSimulation
, glotzmd::Simulation
, glotzmc::McPointers
, glotzmc::McSimulation
, glotzmc::McPointers
- gBeta
: glotzmc::McPointers
, glotzmc::McSimulation
, glotzmc::McPointers
, glotzmc::McSimulation
- gBoundaryConditions
: glotzmc::McPointers
, glotzmc::McSimulation
, glotzmd::Simulation
, glotzmc::McPointers
, glotzmc::McSimulation
- gConvexComponent
: glotzmc::McPointers
, glotzmc::McSimulation
, glotzmc::McPointers
, glotzmc::McSimulation
- gCycleIterator
: glotzannealing::AnnealingModule
- gDimensions
: glotzmc::McPointers
, glotzmc::McSimulation
, glotzmc::McPointers
, glotzmd::Simulation
- Ge
: glotzsimapi::atom
- Gene()
: Gene
- GeneBit()
: GeneBit
- GeneBitType
: GeneBit
- GeneralLjPotential()
: glotzmd::GeneralLjPotential
- GeneratePoints()
: glotzdatasources::RandomConfiguration
- GenerateTables()
: glotzmc::HybridInteraction
- GeneSplice()
: Gene
- GeneticAlgorithm()
: GeneticAlgorithm
- GeneticAlgorithm_MPI()
: GeneticAlgorithm_MPI
- gEnsemble
: glotztps::TpsModule< S, E >
, glotztps::TpsPointers
- Get()
: glotzutil::ManagedList< T >
- GetAcceptanceProbability()
: glotztps::TpsTrialMove
, glotzmc::TrialMove
, glotzptempering::PtTrialMove
- GetAdjacencyMatrix()
: glotzptempering::ParallelTempering
- GetAllData()
: Gene
- GetAngularVelocity()
: glotzmd::RigidBody
- GetAperature()
: glotzopengl::Camera
- GetArea()
: glotzmc::ConvexComponent
- getAtom()
: molesimAPI::IAPIAtomSet
, molesimAPI::IAPIBoxAtomEvent
, glotzwrappers::GlotzillaAtomSet
, glotzwrappers::GlotzillaBoxAtomEvent
- getAtomCount()
: molesimAPI::IAPIAtomSet
, glotzwrappers::GlotzillaAtomSet
- getAtomIndex1()
: glotzwrappers::PotentialGroup
- getAtomIndex2()
: glotzwrappers::PotentialGroup
- GetAttemptsPerCycle()
: glotzmc::TrialMove
, glotzptempering::PtTrialMove
, glotztps::TpsTrialMove
- GetAverageFitness()
: GeneticAlgorithm
, GeneticAlgorithm_MPI
- GetBarrierHeight()
: glotzmc::DoubleWellPotential
- GetBarrierPosition()
: glotzmc::DoubleWellPotential
- GetBarrierWidth()
: glotzmc::DoubleWellPotential
- GetBead()
: glotzmc::OldCell< bead_t, convex_t, patchybead_t >
, glotzmd::Particle
, glotzmd::PointParticle
, glotzmd::Polymer
, glotzmd::RigidParticle
- GetBeadList()
: glotzmd::Simulation
- GetBeadMass()
: glotzmc::McTetrahedron
- GetBeadPtr()
: glotzmd::Polymer
- GetBeadRadius()
: glotzmc::McTetrahedron
- GetBeadsPerEdge()
: glotzmc::McTetrahedron
- GetBeadToBeadDistance()
: glotzmc::McTetrahedron
- GetBeadType()
: glotzmc::McTetrahedron
- GetBegin()
: glotzutil::ObjectFactory< BaseClassType, UniqueIdType >
- GetBestFitness()
: GeneticAlgorithm
, GeneticAlgorithm_MPI
- GetBin()
: glotzmath::DynamicHistogram< T >
- GetBinSize()
: glotzmath::DynamicHistogram< T >
- GetBoltzmannConstant()
: glotzmc::Units
, glotzsimapi::Units
- getBoundary()
: molesimAPI::IAPIBox
, glotzwrappers::GlotzillaBox
- GetBoundaryConditions()
: glotzmc::McSimulation
, glotzmc::TrialMove
, glotzmc::McSimulation
, glotzmc::TrialMove
, glotzmd::Simulation
- getBoundingBox()
: molesimAPI::IAPIBoundary
, glotzwrappers::GlotzillaBoundary
- getBox()
: molesimAPI::IAPISimulation
, glotzwrappers::GlotzillaBoundary
, glotzwrappers::GlotzillaBoxEvent
, glotzwrappers::GlotzillaSimulation
- GetBox()
: glotzmc::BoundaryConditions
, glotzsimapi::BoundaryConditions
- getBox()
: molesimAPI::IAPIBoundary
, molesimAPI::IAPIBoxEvent
- getBoxCount()
: molesimAPI::IAPISimulation
, glotzwrappers::GlotzillaSimulation
- GetBoxDimension()
: glotzopt::CellList
- GetBoxFormatSequence()
: glotzmc::McWriteCenterOfMass
, glotzmc::McWriteCoordinates
- GetBySeq()
: glotzutil::ManagedList< T >
- GetC_Bit()
: GeneBit
- GetCamera()
: glotzopengl::GlutWindow
- GetCauchyFloat()
: glotzmath::RandomNumberGenerator
- GetCauchyVector()
: glotzmath::RandomNumberGenerator
- GetCell()
: glotzopt::CellList
- GetCellContaining()
: glotzopt::CellList
- GetCellList()
: glotzopt::PairList
- GetCellListId()
: glotzopt::PositionedObject
- GetCenterObject()
: glotzcluster::Cluster
- GetCenterOfMass()
: glotzmc::McTetrahedron
, glotzmd::RigidBody
- GetCenteroid()
: glotzmc::ConvexComponent
- getChildIndex()
: molesimAPI::IAPIAtomTypeLeaf
, glotzwrappers::GlotzillaAtomTypeLeaf
- getChildList()
: molesimAPI::IAPIMolecule
, glotzwrappers::GlotzillaMolecule
, glotzwrappers::GlotzillaMonatomicMolecule
, glotzwrappers::GlotzillaPolymer
- getChildType()
: molesimAPI::IAPISpecies
, glotzwrappers::GlotzillaSpecies
- getChildTypeCount()
: molesimAPI::IAPISpecies
, glotzwrappers::GlotzillaSpecies
- GetChromosomeLength()
: Gene
- GetCluster()
: glotzcluster::ClusteringAlgorithm
, glotzcluster::ClusterLibrary
, glotzcluster::ShapeDescriptor
- GetClusters()
: glotzcluster::ClusteringAlgorithm
, glotzcluster::ClusterLibrary
- GetColumnVector()
: glotzmath::Matrix< TYPE, ROWS, COLS >
- getConformation()
: molesimAPI::IAPISpecies
, glotzwrappers::GlotzillaSpecies
- GetConvexComponent()
: glotzmc::OldCell< bead_t, convex_t, patchybead_t >
- GetCoordinateFormatSequence()
: glotzmc::McWriteCenterOfMass
, glotzmc::McWriteCoordinates
- GetCopyOfGeneAtLocation()
: GeneticAlgorithm
- GetCustomBit()
: GeneBit
- GetCustomBitIndex()
: GeneBit
- GetCustomBitSize()
: GeneBit
- GetCustomBitValue()
: GeneBit
- GetCutoff()
: glotzmc::ConvexComponent
, glotzmc::HardSpherePotential
, glotzmc::HarrowellPotential
, glotzmc::IdealGasPotential
, glotzmc::ConvexComponent
, glotzmc::HardSpherePotential
, glotzmc::HarrowellPotential
, glotzmc::IdealGasPotential
, glotzmc::Potential
, glotzmc::SoftPotential
, glotzmc::SquareWellPotential
, glotzmc::TwelveSixLjPotential
, glotzmc::WcaPotential
, glotzmc::YukawaPotential
, glotzmc::Potential
, glotzmc::SoftPotential
, glotzmc::SquareWellPotential
, glotzmc::TwelveSixLjPotential
, glotzmc::WcaPotential
, glotzmc::YukawaPotential
, glotzmd::DzugutovPotential
, glotzmd::GeneralLjPotential
, glotzmd::LinearInterpPotential< TABLE_SIZE >
, glotzmd::Potential
, glotzmd::SoftPotential
, glotzmd::TwelveSixLjPotential
- GetCutoffSq()
: glotzmc::BinaryLJ
, glotzmc::BinaryLJGlass
, glotzmc::BinaryMixtureInteraction
, glotzmc::BlankInteraction
, glotzmc::ConvexComponent
, glotzmc::CustomInteraction
, glotzmc::CustomInteractionNew
, glotzmc::Dzugutov
, glotzmc::HardSphere
, glotzmc::Harrowell
, glotzmc::HybridInteraction
, glotzmc::Interaction
, glotzmc::LennardJones
, glotzmc::LennardJonesLongRangeCorrected
, glotzmc::BinaryLJ
, glotzmc::BinaryLJGlass
, glotzmc::BinaryMixtureInteraction
, glotzmc::BlankInteraction
, glotzmc::ConvexComponent
, glotzmc::CustomInteraction
, glotzmc::CustomInteractionNew
, glotzmc::Dzugutov
, glotzmc::HardSphere
, glotzmc::Harrowell
, glotzmc::HybridInteraction
, glotzmc::Interaction
, glotzmc::LennardJones
, glotzmc::LennardJonesLongRangeCorrected
, glotzmc::SingleComponentInteraction
, glotzmc::SoftInteraction
, glotzmc::WeeksChandlerAndersen
, glotzmc::Yukawa
, glotzmc::YukawaPotential
, glotzmc::SingleComponentInteraction
, glotzmc::SoftInteraction
, glotzmc::WeeksChandlerAndersen
, glotzmc::Yukawa
, glotzmc::YukawaPotential
, glotzmd::Potential
- GetCycleLength()
: glotzannealing::ThermalCycle
- getD()
: molesimAPI::IAPIVector
, glotzwrappers::GlotzillaVector3D
- GetD_Bit()
: GeneBit
- GetD_Delta()
: GeneBit
- GetD_Max()
: GeneBit
- GetD_Min()
: GeneBit
- GetData()
: glotzdynanalysis::AveragedOverlapParameter
, glotzdynanalysis::AveragedSquaredDisplacement
, glotzdynanalysis::AveragedStructureSelfCorrelation
, glotzdynanalysis::DistanceMatrix
, glotzdynanalysis::OverlapMatrix
, glotzdynanalysis::StructureSelfCorrelationMatrix
, glotzstdanalysis::RadialDistributionFunction
- GetDelta()
: glotzmc::McBeadPatch
- GetDescription()
: glotzannealing::ThermalCycle
, glotzmd::Potential
, glotzmd::SimulationModifier
- GetDescriptor()
: glotzsimapi::WriteObject
, glotztps::TpsSimulationComponent
- GetDescriptorAssociatedWith()
: glotzcluster::StandardMatchingAlgorithm
- GetDestination()
: glotzmc::Edge
- getDiameter()
: molesimAPI::IAPIAtomTypeSphere
, glotzwrappers::GlotzillaAtomTypeSphere
- getDimensions()
: molesimAPI::IAPIBoundary
, glotzwrappers::GlotzillaBoundary
- GetDimensions()
: glotzmc::McSimulation
, glotzmc::TrialMove
, glotzmc::McSimulation
, glotzmc::TrialMove
, glotzmd::Simulation
- GetDirectors()
: glotzmc::McParallelepiped
- GetDistanceTable()
: glotzmc::Potential
- GetEdges()
: glotzmc::PlanarGraph
- GetEffectiveGeneLength()
: Gene
- GetEffectiveLength()
: GeneBit
- GetEnd()
: glotzutil::ObjectFactory< BaseClassType, UniqueIdType >
- GetEnsemble()
: glotzmd::BerendsenThermostat
, glotzmd::IntegrationScheme
, glotzmd::LangevinThermostat
, glotzmd::Simulation
, glotzmd::SimulationModifier
- GetEnsembleExtensives()
: glotzmc::McSimulation
, glotzmc::Simulation
, glotzmc::McSimulation
, glotzsimapi::SimulationApi
, ensembles::McNPTSimulation
- GetEnsembleIntensives()
: glotzmc::McSimulation
, glotzmc::Simulation
, glotzmc::McSimulation
, glotzsimapi::SimulationApi
, ensembles::McNPTSimulation
- GetEpsilon()
: glotzmc::HarrowellPotential
, glotzmc::SoftPotential
, glotzmc::SquareWellPotential
, glotzmc::TwelveSixLjPotential
, glotzmc::WcaPotential
, glotzmc::YukawaPotential
, glotzmc::SoftPotential
, glotzmc::SquareWellPotential
, glotzmc::TwelveSixLjPotential
, glotzmc::WcaPotential
, glotzmc::YukawaPotential
, glotzmd::GeneralLjPotential
, glotzmd::SoftPotential
, glotzmd::TwelveSixLjPotential
- GetErrorList()
: glotzmd::Simulation
- getEventManager()
: molesimAPI::IAPIBox
, molesimAPI::IAPISimulation
, glotzwrappers::GlotzillaBox
, glotzwrappers::GlotzillaSimulation
- GetExponentialFactor()
: glotzannealing::SigmoidCycle
- GetExponentialFloat()
: glotzmath::RandomNumberGenerator
- GetExponentialVector()
: glotzmath::RandomNumberGenerator
- GetEyeSeparation()
: glotzopengl::Camera
- GetF_Bit()
: GeneBit
- GetF_Delta()
: GeneBit
- GetF_Max()
: GeneBit
- GetF_Min()
: GeneBit
- GetFaces()
: glotzmc::PlanarGraph
- GetFieldDirection()
: glotzmc::McTetrahedralField
- GetFieldStrength()
: glotzmc::McField
- GetFinalTemperature()
: glotzannealing::ThermalCycle
- GetFirst()
: glotzopt::Pair
- GetFitness()
: HillClimb
, SimulatedAnnealing
- GetFocalLength()
: glotzopengl::Camera
- GetForce()
: glotzmd::InteractingObject
, glotzmd::RigidBody
- GetForceShift()
: glotzmd::GeneralLjPotential
, glotzmd::SoftPotential
, glotzmd::TwelveSixLjPotential
- GetForceTable()
: glotzmc::Potential
- GetFrequency()
: glotzmc::McSimulationComponent
, glotzsimapi::WriteObject
, glotztps::TpsSimulationComponent
- GetFshift()
: glotzmc::YukawaPotential
- GetFullPath()
: glotzsimapi::WriteObject
- GetFunction()
: glotzdynanalysis::DynamicsAnalysis
, glotzdynanalysis::NonGaussianParameter
- GetGaussianFloat()
: glotzmath::RandomNumberGenerator
- GetGaussianVector()
: glotzmath::RandomNumberGenerator
- GetGene()
: GeneticAlgorithm
, HillClimb
, SimulatedAnnealing
- GetGeneBitAtLocation()
: Gene
- GetGeneBitType()
: GeneBit
- GetGenericFormatSequence()
: glotzmc::McWriteCenterOfMass
, glotzmc::McWriteCoordinates
, glotzmc::McWriteDensity
, glotzmc::McWritePotential
, ensembles::McNPTWritePressure
- getGlobalIndex()
: glotzwrappers::GlotzillaMonatomicMolecule
, glotzwrappers::GlotzillaPolymer
- getGlotzBead()
: glotzwrappers::GlotzillaAtomLeaf
- getGlotzillaBoundary()
: glotzwrappers::GlotzillaBoundary
- getGlotzillaSim()
: glotzwrappers::GlotzillaSimulation
- getGlotzParticle()
: glotzwrappers::GlotzillaMolecule
, glotzwrappers::GlotzillaMonatomicMolecule
, glotzwrappers::GlotzillaPolymer
- getGlotzPotential()
: glotzwrappers::GlotzillaDzugutovPotential
, glotzwrappers::GlotzillaLJPotential
, glotzwrappers::GlotzillaPotential
, glotzwrappers::GlotzillaTwelveSixLjPotential
, glotzwrappers::GlotzillaWCAPotential
- getGlotzVector()
: glotzwrappers::GlotzillaVector3D
- GetGroupId()
: glotzopengl::GlObject
- GetHeight()
: glotzmc::McRectangularCube
- GetHistogram()
: glotzmath::Statistic
- GetI_Bit()
: GeneBit
- GetI_Bit_Size()
: GeneBit
- GetIdentifier()
: glotzutil::Serializable
- GetIncidentEdge()
: glotzmc::Vertex
- GetIncidentFace()
: glotzmc::Edge
- getIndex()
: molesimAPI::IAPIAtomLeaf
, molesimAPI::IAPIAtomType
, molesimAPI::IAPIBox
, molesimAPI::IAPIMolecule
, molesimAPI::IAPISpecies
, glotzwrappers::GlotzillaAtomLeaf
, glotzwrappers::GlotzillaAtomType
, glotzwrappers::GlotzillaBox
, glotzwrappers::GlotzillaMolecule
, glotzwrappers::GlotzillaSpecies
, glotzwrappers::GlotzillaSpeciesSpheresMono
, glotzwrappers::GlotzillaSpeciesSpheresPolymer
- GetIndexOf()
: glotzutil::ManagedList< T >
- GetInitialIndex()
: glotzptempering::ParallelTempering
, glotzptempering::ParallelTemperingMPI
- GetInitialIndexList()
: glotzptempering::ParallelTempering
- GetInitialTemperature()
: glotzannealing::ThermalCycle
- GetInnerComponent()
: glotzmc::Face
- GetInteractingType1()
: glotzmd::Potential
- GetInteractingType2()
: glotzmd::Potential
- GetInteraction()
: glotzmc::McSimulation
- getIntervalAction()
: molesimAPI::IAPIIntegrator
, glotzwrappers::GlotzillaIntegrator
- getIntervalActionCount()
: molesimAPI::IAPIIntegrator
, glotzwrappers::GlotzillaIntegrator
- GetIsInverted()
: glotzdatasources::Stencil
, glotzdatasources::StencilUnion
- getJavaClassName()
: glotzwrappers::GlotzillaEvent
- GetKappa()
: glotzmc::YukawaPotential
- GetKeyboard()
: glotzopengl::GlutWindow
- GetLambda()
: glotzmc::SquareWellPotential
- GetLargestDisplacement()
: glotzopengl::Arrow
, glotzopengl::Box
, glotzopengl::Cylinder
, glotzopengl::Disk
, glotzopengl::GlObject
, glotzopengl::SphereBase
- getLeafIndex()
: molesimAPI::IAPIAtomLeaf
, molesimAPI::IAPIBox
, glotzwrappers::GlotzillaAtomLeaf
, glotzwrappers::GlotzillaBox
- getLeafList()
: molesimAPI::IAPIBox
, glotzwrappers::GlotzillaBox
- GetLength()
: glotzmc::McRectangularCube
- GetListOfSuccessors()
: Gene
- GetLongRangePotentialCorrection()
: glotzmc::Interaction
, glotzmc::LennardJonesLongRangeCorrected
, glotzmc::Interaction
, glotzmc::LennardJonesLongRangeCorrected
- GetLongRangePressureCorrection()
: glotzmc::Interaction
, glotzmc::LennardJonesLongRangeCorrected
, glotzmc::Interaction
, glotzmc::LennardJonesLongRangeCorrected
- getMapping()
: glotzwrappers::AtomTypeManager
, glotzwrappers::ObjectManager
- GetMass()
: glotzmc::MdBead
, glotzmd::Bead
, glotzmd::Particle
, glotzmd::PointParticle
, glotzmd::Polymer
, glotzmd::RigidBody
, glotzmd::RigidParticle
- getMass()
: molesimAPI::IAPIAtomTypeLeaf
, glotzwrappers::GlotzillaAtomTypeLeaf
- GetMaxBound()
: glotzdatasources::Stencil
, glotzdatasources::StencilUnion
- GetMaxCutoff()
: glotzmc::WeeksChandlerAndersen
, glotzmc::Yukawa
, glotzmc::SingleComponentInteraction
, glotzmc::SoftInteraction
, glotzmc::WeeksChandlerAndersen
, glotzmc::Yukawa
, glotzmc::BinaryLJ
, glotzmc::BinaryLJGlass
, glotzmc::BinaryMixtureInteraction
, glotzmc::BlankInteraction
, glotzmc::CustomInteraction
, glotzmc::CustomInteractionNew
, glotzmc::Dzugutov
, glotzmc::HardSphere
, glotzmc::Harrowell
, glotzmc::HybridInteraction
, glotzmc::Interaction
, glotzmc::LennardJones
, glotzmc::LennardJonesLongRangeCorrected
, glotzmc::BinaryLJ
, glotzmc::BinaryLJGlass
, glotzmc::BinaryMixtureInteraction
, glotzmc::BlankInteraction
, glotzmc::CustomInteraction
, glotzmc::CustomInteractionNew
, glotzmc::Dzugutov
, glotzmc::HardSphere
, glotzmc::Harrowell
, glotzmc::HybridInteraction
, glotzmc::Interaction
, glotzmc::LennardJones
, glotzmc::LennardJonesLongRangeCorrected
, glotzmc::SingleComponentInteraction
, glotzmc::SoftInteraction
- GetMaxDistanceFromCenteroid()
: glotzmc::ConvexComponent
- GetMaximumTranslation()
: glotzmc::McParticle
- GetMaxStepSize()
: glotzmc::TrialMove
, glotzmc::TrialVolumeChange
, glotzmc::TrialMove
, glotzmc::TrialVolumeChange
- GetMinBound()
: glotzdatasources::Stencil
, glotzdatasources::StencilUnion
- GetMinDistanceFromCenteroid()
: glotzmc::ConvexComponent
- getMoleculeList()
: molesimAPI::IAPIBox
, glotzwrappers::GlotzillaBox
- GetMouse()
: glotzopengl::GlutWindow
- GetMovesAccepted()
: glotzmc::TrialMove
- GetMovesAttempted()
: glotzmc::TrialMove
- GetMovesPerCycle()
: glotzmc::McSimulation
, glotzmc::Simulation
, glotzmc::McSimulation
, glotzsimapi::SimulationApi
- GetName()
: glotzcluster::Cluster
, glotzmath::Mean
, glotzmath::Statistic
, glotzmath::Variance
- GetNeighbor()
: glotzopt::Cell
- GetNeighborsOf()
: glotzopt::CellList
- GetNewVerletList()
: glotzmd::VerletCellForce
, glotzmd::VerletCellForceMulti
, glotzmd::VerletCellForceMultiShifted
, glotzmd::VerletCellForceShifted
, glotzmd::VerletForce
, glotzmd::VerletForceMulti
- GetNextEdge()
: glotzmc::Edge
- GetNextPoint()
: glotzdatasources::Lattice
, glotzdatasources::RandomConfiguration
- getNMolecules()
: molesimAPI::IAPIBox
, glotzwrappers::GlotzillaBox
- getNonintervalListener()
: molesimAPI::IAPIIntegrator
, glotzwrappers::GlotzillaIntegrator
- getNonintervalListenerCount()
: molesimAPI::IAPIIntegrator
, glotzwrappers::GlotzillaIntegrator
- GetNormal()
: glotzmc::ConvexComponent
, glotzmc::Face
, glotzmc::ConvexComponent
, glotzmc::Face
- GetNumberDensity()
: ensembles::McNPTSimulation
- GetNumberOfBeads()
: glotzmd::RigidParticle
, glotzmc::McSimulation
, glotzmd::Particle
, glotzmd::PointParticle
, glotzmd::Polymer
, glotzmd::Simulation
- GetNumberOfBins()
: glotzmath::ConstHistogram< T >
, glotzmath::DynamicHistogram< T >
, glotzmath::StaticHistogram< T, NBINS >
- GetNumberOfCells()
: glotzopt::CellList
- GetNumberOfClusters()
: glotzcluster::ClusteringAlgorithm
, glotzcluster::ClusterLibrary
- GetNumberOfConvexComponents()
: glotzmc::McSimulation
- GetNumberOfCPUs()
: glotzptempering::ParallelTemperingMPI
- GetNumberOfCycles()
: glotzannealing::AnnealingModule
- GetNumberOfNeighbors()
: glotzopt::Cell
- GetNumberOfNonRigidBeads()
: glotzmd::Polymer
- GetNumberOfObjects()
: glotzopt::Cell
, glotzcluster::Cluster
, glotzmd::Simulation
, glotzopt::PairList
, glotzstdanalysis::SystemSnapshot
- GetNumberOfParticles()
: glotzmc::McSimulation
, glotzmc::TrialMove
, glotzmc::McSimulation
, glotzmc::TrialMove
, glotzmd::Simulation
- GetNumberOfPotentials()
: glotzmd::Simulation
- GetNumberOfRigidBodies()
: glotzmd::RigidParticle
, glotzmd::Particle
, glotzmd::Polymer
, glotzmd::Simulation
- GetNumberOfSimulationModifiers()
: glotzmd::Simulation
- GetNumberOfSprings()
: glotzmd::Polymer
, glotzmd::Particle
, glotzmd::Polymer
, glotzmd::Simulation
- getNumLeafAtoms()
: molesimAPI::IAPISpecies
, glotzwrappers::GlotzillaSpecies
, glotzwrappers::GlotzillaSpeciesSpheresMono
, glotzwrappers::GlotzillaSpeciesSpheresPolymer
- GetNumOfSuccessors()
: Gene
- GetNumSuccessors()
: GeneBit
- GetObject()
: glotzcluster::Cluster
, glotzopt::Cell
- GetObject1()
: glotzmd::Spring
- GetObject2()
: glotzmd::Spring
- GetObjects()
: glotzcluster::Cluster
, glotzmd::Simulation
, glotzopengl::GlutWindow
, glotzopt::PairList
, glotzstdanalysis::SystemSnapshot
, glotzopengl::Window
- getOldIndex()
: molesimAPI::IAPIBoxAtomLeafIndexChangedEvent
, glotzwrappers::GlotzillaBoxAtomLeafIndexChangedEvent
- GetOrigin()
: glotzmc::Edge
- GetOuterComponent()
: glotzmc::Face
- GetOutputPath()
: glotzsimapi::WriteData
- GetOverlapCutoff()
: glotzmc::TwelveSixLjPotential
, glotzmc::DzugutovPotential
, glotzmc::HardSpherePotential
, glotzmc::DzugutovPotential
, glotzmc::HardSpherePotential
, glotzmc::IdealGasPotential
, glotzmc::SoftPotential
, glotzmc::SquareWellPotential
, glotzmc::TwelveSixLjPotential
, glotzmc::WcaPotential
, glotzmc::Potential
, glotzmc::SoftPotential
, glotzmc::SquareWellPotential
, glotzmc::WcaPotential
, glotzmd::DzugutovPotential
, glotzmd::GeneralLjPotential
, glotzmd::Potential
, glotzmd::SoftPotential
, glotzmd::TwelveSixLjPotential
, glotzmd::LinearInterpPotential< TABLE_SIZE >
, glotzmc::Potential
, glotzmc::IdealGasPotential
- GetOverlapCutoffSq()
: glotzmc::BinaryLJGlass
, glotzmc::BinaryMixtureInteraction
, glotzmc::BlankInteraction
, glotzmc::CustomInteraction
, glotzmc::CustomInteractionNew
, glotzmc::Dzugutov
, glotzmc::HardSphere
, glotzmc::Harrowell
, glotzmc::HybridInteraction
, glotzmc::Interaction
, glotzmc::LennardJonesLongRangeCorrected
, glotzmc::BinaryLJ
, glotzmc::BinaryLJGlass
, glotzmc::BlankInteraction
, glotzmc::CustomInteraction
, glotzmc::CustomInteractionNew
, glotzmc::Dzugutov
, glotzmc::HardSphere
, glotzmc::Harrowell
, glotzmc::Interaction
, glotzmc::LennardJones
, glotzmc::LennardJonesLongRangeCorrected
, glotzmc::SoftInteraction
, glotzmc::WeeksChandlerAndersen
, glotzmc::Yukawa
, glotzmc::SoftInteraction
, glotzmc::WeeksChandlerAndersen
, glotzmc::Yukawa
, glotzmd::Potential
, glotzmc::SingleComponentInteraction
, glotzmc::BinaryMixtureInteraction
, glotzmc::SingleComponentInteraction
, glotzmc::HybridInteraction
, glotzmc::BinaryLJ
, glotzmc::LennardJones
, glotzmc::HardSphere
- getPairCount()
: glotzwrappers::PotentialGroup
- GetPairList()
: glotzopt::VerletList
- GetParent()
: glotzmd::RigidBody
, glotzopt::PositionedObject
- getParentGroup()
: molesimAPI::IAPIAtomLeaf
, glotzwrappers::GlotzillaAtomLeaf
- GetParentWindow()
: glotzopengl::GlotzGlBaseObject
- GetParticleIndex()
: glotzmc::TrialMove
, glotzmc::McField
, glotzmc::TrialMove
, glotzmc::McField
- GetParticleList()
: glotzmd::Simulation
- GetPatchyBead()
: glotzmc::OldCell< bead_t, convex_t, patchybead_t >
- GetPoint()
: glotzdatasources::Lattice
, glotzdatasources::RandomConfiguration
- GetPopSize()
: GeneticAlgorithm
- getPosition()
: molesimAPI::IAPIAtomPositioned
, glotzwrappers::GlotzillaAtomLeaf
- GetPosition()
: glotzmc::ConvexComponent
, glotzmc::Vertex
, glotzopt::PositionedObject
, glotzmc::Vertex
, glotzdatasources::Stencil
- getPositionDefinition()
: molesimAPI::IAPISpecies
, glotzwrappers::GlotzillaSpecies
- getPotential()
: glotzwrappers::PotentialGroup
- getPotentialCount()
: glotzwrappers::PotentialGroup
- GetPotentialEnergy()
: glotzmc::MdBead
, glotzmd::InteractingObject
- GetPotentialRoutine()
: glotzmc::McSimulation
, glotzmc::TrialMove
, glotzmc::McSimulation
, glotzmc::TrialMove
- GetPotentialShift()
: glotzmd::SoftPotential
, glotzmd::TwelveSixLjPotential
, glotzmd::GeneralLjPotential
- GetPotentialTable()
: glotzmc::Potential
- GetPower()
: glotzmd::GeneralLjPotential
- GetPressure()
: glotzmc::TrialVolumeChange
, ensembles::McNPTSimulation
- GetPreviousEdge()
: glotzmc::Edge
- GetPrincipleMoments()
: glotzmd::RigidBody
- GetPshift()
: glotzmc::YukawaPotential
- GetPtrToBeads()
: glotzmc::McSimulation
- GetPtrToConvexComponents()
: glotzmc::McSimulation
- GetPtrToFields()
: glotzmc::McSimulation
, glotzmc::TrialMove
, glotzmc::McSimulation
- GetPtrToParticles()
: glotzmc::McSimulation
, glotzmc::TrialMove
- GetPtrToPatchyBeads()
: glotzmc::McSimulation
- GetPtrToSimulationComponents()
: glotzmc::McSimulation
- GetPtrToSimulations()
: glotzptempering::ParallelTempering
- GetPtrToTrialMoves()
: glotzmc::McSimulation
- GetPtrToWriteData()
: glotzmc::McSimulation
- GetQuaternion()
: glotzmd::RigidBody
, glotzmc::McParticle
- GetRadius()
: glotzsimapi::BeadApi
- GetRandGen()
: Gene
, GeneBit
- getRandom()
: molesimAPI::IAPISimulation
, glotzwrappers::GlotzillaSimulation
- GetRandomNumberGenerator()
: glotzmd::LangevinThermostat
, glotzptempering::ParallelTempering
, glotzmc::McSimulation
, glotzmc::TrialMove
, glotzptempering::PtTrialMove
, glotzmc::McSimulation
, glotzptempering::ParallelTemperingMPI
- getRange()
: glotzwrappers::GlotzillaTwelveSixLjPotential
, glotzwrappers::GlotzillaWCAPotential
, glotzwrappers::GlotzillaPotential
, glotzwrappers::GlotzillaDzugutovPotential
, molesimAPI::IAPIPotential
, glotzwrappers::GlotzillaLJPotential
, glotzwrappers::PotentialGroup
, glotzwrappers::GlotzillaHarmonicBond
- GetRank()
: GeneticAlgorithm_MPI
- GetReferenceSnapshot()
: glotzdynanalysis::DynamicsAnalysis
- GetReferenceVectors()
: glotzmc::McTetrahedron
- GetRigidBody()
: glotzmd::Particle
, glotzmd::Polymer
, glotzmd::RigidParticle
- GetRigidBodyId()
: glotzmd::InteractingObject
- GetRotation()
: glotzopengl::Trackball
- GetRotationMatrix()
: glotzmd::RigidBody
- GetRowVector()
: glotzmath::Matrix< TYPE, ROWS, COLS >
- GetScreenHeight()
: glotzopengl::Camera
- GetScreenWidth()
: glotzopengl::Camera
- GetSecond()
: glotzopt::Pair
- GetSeed()
: GeneBit
- GetSequencer()
: glotzopt::CellList
, glotzsimapi::SpringApi
, glotzcluster::ClusterLibrary
, glotzmd::RigidBody
, glotzmd::Spring
, glotzopt::Cell
, glotzopengl::GlotzGlBaseObject
, glotzutil::Listable
- GetSigma()
: glotzmc::WcaPotential
, glotzmc::YukawaPotential
, glotzmc::SoftPotential
, glotzmd::SoftPotential
, glotzmc::HarrowellPotential
, glotzmc::TwelveSixLjPotential
, glotzmc::WcaPotential
, glotzmc::HarrowellPotential
, glotzmc::SoftPotential
, glotzmc::TwelveSixLjPotential
, glotzmc::SquareWellPotential
, glotzmd::GeneralLjPotential
, glotzmc::SquareWellPotential
, glotzmc::YukawaPotential
, glotzmd::TwelveSixLjPotential
- GetSimulation()
: glotzptempering::ParallelTemperingMPI
, glotzptempering::ParallelTempering
- getSpecies()
: molesimAPI::IAPIAtomTypeLeaf
, molesimAPI::IAPISpeciesManager
, glotzwrappers::GlotzillaSpeciesManager
, glotzwrappers::GlotzillaAtomTypeLeaf
- getSpeciesCount()
: glotzwrappers::GlotzillaSpeciesManager
, molesimAPI::IAPISpeciesManager
- getSpeciesManager()
: molesimAPI::IAPISimulation
, glotzwrappers::GlotzillaSimulation
- GetSpread()
: glotzmc::McBeadPatch
- GetSpring()
: glotzmd::Particle
, glotzmd::Polymer
- GetSpringConstant()
: glotzsimapi::SpringApi
, glotzmd::Spring
, glotzmc::Spring
- getSpringConstant()
: glotzwrappers::GlotzillaHarmonicBond
- getStepCount()
: molesimAPI::IAPIIntegrator
, glotzwrappers::GlotzillaIntegrator
- GetStepSizeUpdateFrequency()
: glotzmc::TrialMove
- GetSuccess()
: HillClimb_MPI
, HillClimb
- GetSuccessors()
: GeneBit
- GetTargetAcceptanceProbability()
: glotzmc::TrialMove
- GetTargetExtent()
: glotzsimapi::SpringApi
, glotzmd::FeneSpring
- getTargetExtent()
: glotzwrappers::GlotzillaHarmonicBond
- GetTargetExtent()
: glotzmc::Spring
, glotzmd::Spring
- GetTargetPressure()
: glotzmd::SimulationModifier
, glotzmd::IntegrationScheme
, glotzmd::Simulation
- GetTargetTemperature()
: glotzmd::Simulation
, glotzmd::SimulationModifier
, glotzmd::IntegrationScheme
, glotzmd::BerendsenThermostat
, glotzmd::LangevinThermostat
- GetTemp()
: SimulatedAnnealing
- GetTemperature()
: glotzmc::TrialMove
, glotzmc::McSimulation
, glotzmc::TrialMove
, glotzmc::McSimulation
, glotzsimapi::Thermostat
- GetTime()
: glotzmc::McSimulation
, glotzstdanalysis::SystemSnapshot
, glotzptempering::ParallelTemperingMPI
- GetTimestep()
: glotzmd::Simulation
- GetTimesteps()
: glotzmc::McSimulation
, glotzsimapi::SimulationApi
, glotzmd::Simulation
- GetTolerance()
: glotzmc::ConvexComponent
- GetTorque()
: glotzmd::RigidBody
- GetTotalCycleLength()
: glotzannealing::AnnealingModule
- GetTrackball()
: glotzopengl::GlutWindow
- GetTwinEdge()
: glotzmc::Edge
- GetType()
: glotzmc::Bead
- getType()
: molesimAPI::IAPIMolecule
- GetType()
: glotzmc::Bead
, glotzopt::PositionedObject
- getType()
: glotzwrappers::GlotzillaAtomLeaf
, glotzwrappers::GlotzillaMolecule
, molesimAPI::IAPIAtomLeaf
- GetUniformFloat()
: glotzmath::RandomNumberGenerator
, glotzmath::StdLibErand48
, glotzmath::RandomNumberGenerator
- GetUniformInt()
: glotzmath::RandomNumberGenerator
- GetUniformQuaternion()
: glotzmath::RandomNumberGenerator
- GetUniformVector()
: glotzmath::RandomNumberGenerator
- GetUnits()
: glotzmc::McSimulation
- GetValue()
: glotzmath::Mean
, glotzmath::Variance
, glotzmath::Statistic
- GetVector()
: glotzcluster::RealShapeDescriptor
, glotzcluster::ComplexShapeDescriptor
- GetVelocity()
: glotzmd::InteractingObject
, glotzmd::RigidBody
, glotzmc::MdBead
- GetVertices()
: glotzmc::PlanarGraph
- GetViewDirectionX()
: glotzopengl::Camera
- GetViewDirectionY()
: glotzopengl::Camera
- GetViewDirectionZ()
: glotzopengl::Camera
- GetViewPositionX()
: glotzopengl::Camera
- GetViewPositionY()
: glotzopengl::Camera
- GetViewPositionZ()
: glotzopengl::Camera
- GetViewUpX()
: glotzopengl::Camera
- GetViewUpY()
: glotzopengl::Camera
- GetViewUpZ()
: glotzopengl::Camera
- GetVirial()
: glotzmd::InteractingObject
, glotzmc::MdBead
- GetVirialTable()
: glotzmc::Potential
- GetVolume()
: glotzmc::ConvexComponent
, glotzmc::BoundaryConditions
, glotzsimapi::BoundaryConditions
, glotzmc::ConvexComponent
, ensembles::McNPTSimulation
- GetWidth()
: glotzmc::McRectangularCube
- GetWindowID()
: glotzopengl::GlutWindow
- GetWorldRotation()
: glotzopengl::Trackball
- GetWriteObjects()
: glotzsimapi::WriteData
- gEventManager
: glotzmd::Simulation
- gExtensive
: glotzsimapi::SimulationApi
, glotzmc::Simulation
- gField
: glotzmc::McPointers
, glotzmc::McSimulation
, glotzmc::McPointers
- gForceRoutine
: glotzmd::Simulation
- gGlutMaster
: glotzopengl::GlutWindow
- gIntegrationScheme
: glotzmd::Simulation
- gIntensive
: glotzmc::Simulation
, glotzsimapi::SimulationApi
- gInteractingObject
: glotzmd::Simulation
- gInteraction
: glotzmc::McPointers
, glotzmc::McSimulation
- GlObject()
: glotzopengl::GlObject
- glotzBead
: glotzwrappers::GlotzillaAtomLeaf
- GlotzGlBaseObject()
: glotzopengl::GlotzGlBaseObject
- GLOTZILLA_MC
: glotzsimapi::SimulationApi
- GLOTZILLA_MD
: glotzsimapi::SimulationApi
- GLOTZILLA_PT
: glotzsimapi::SimulationApi
- GlotzillaAtomKinetic()
: glotzwrappers::GlotzillaAtomKinetic
- GlotzillaAtomLeaf()
: glotzwrappers::GlotzillaAtomLeaf
- GlotzillaAtomPositionDefinitionSimple()
: glotzwrappers::GlotzillaAtomPositionDefinitionSimple
- GlotzillaAtomSet()
: glotzwrappers::GlotzillaAtomSet
- GlotzillaAtomType()
: glotzwrappers::GlotzillaAtomType
- GlotzillaAtomTypeLeaf()
: glotzwrappers::GlotzillaAtomTypeLeaf
- GlotzillaAtomTypeSphere()
: glotzwrappers::GlotzillaAtomTypeSphere
- GlotzillaBoundary()
: glotzwrappers::GlotzillaBoundary
- GlotzillaBox()
: glotzwrappers::GlotzillaBox
- GlotzillaBoxAtomAddedEvent()
: glotzwrappers::GlotzillaBoxAtomAddedEvent
- GlotzillaBoxAtomEvent()
: glotzwrappers::GlotzillaBoxAtomEvent
- GlotzillaBoxAtomLeafIndexChangedEvent()
: glotzwrappers::GlotzillaBoxAtomLeafIndexChangedEvent
- GlotzillaBoxAtomRemovedEvent()
: glotzwrappers::GlotzillaBoxAtomRemovedEvent
- GlotzillaBoxEvent()
: glotzwrappers::GlotzillaBoxEvent
- GlotzillaBruteForcePotentialMaster()
: glotzwrappers::GlotzillaBruteForcePotentialMaster
- GlotzillaBruteForceShiftedPotentialMaster()
: glotzwrappers::GlotzillaBruteForceShiftedPotentialMaster
- GlotzillaCellForceMultiPotentialMaster()
: glotzwrappers::GlotzillaCellForceMultiPotentialMaster
- GlotzillaCellForcePotentialMaster()
: glotzwrappers::GlotzillaCellForcePotentialMaster
- GlotzillaCellForceShiftedPotentialMaster()
: glotzwrappers::GlotzillaCellForceShiftedPotentialMaster
- GlotzillaDzugutovPotential()
: glotzwrappers::GlotzillaDzugutovPotential
- GlotzillaEulerIntegrator()
: glotzwrappers::GlotzillaEulerIntegrator
- GlotzillaHarmonicBond()
: glotzwrappers::GlotzillaHarmonicBond
- GlotzillaIntegrator()
: glotzwrappers::GlotzillaIntegrator
- GlotzillaLeapFrogIntegrator()
: glotzwrappers::GlotzillaLeapFrogIntegrator
- GlotzillaLJPotential()
: glotzwrappers::GlotzillaLJPotential
- GlotzillaMolecule()
: glotzwrappers::GlotzillaMolecule
- GlotzillaMonatomicMolecule()
: glotzwrappers::GlotzillaMonatomicMolecule
- GlotzillaNativeAtomPositionDefinition()
: glotzwrappers::GlotzillaNativeAtomPositionDefinition
- GlotzillaNativeConformation()
: glotzwrappers::GlotzillaNativeConformation
- GlotzillaNativeListener()
: glotzwrappers::GlotzillaNativeListener
- GlotzillaPeriodicBoundary()
: glotzwrappers::GlotzillaPeriodicBoundary
- GlotzillaPolymer()
: glotzwrappers::GlotzillaPolymer
- GlotzillaPostBoundaryAction()
: glotzwrappers::GlotzillaPostBoundaryAction
- GlotzillaPostMovePostForceAction()
: glotzwrappers::GlotzillaPostMovePostForceAction
- GlotzillaPostMovePreForceAction()
: glotzwrappers::GlotzillaPostMovePreForceAction
- GlotzillaPotentialMaster()
: glotzwrappers::GlotzillaPotentialMaster
- GlotzillaPreBoundaryAction()
: glotzwrappers::GlotzillaPreBoundaryAction
- GlotzillaPreMovePostForceAction()
: glotzwrappers::GlotzillaPreMovePostForceAction
- GlotzillaPreMovePreForceAction()
: glotzwrappers::GlotzillaPreMovePreForceAction
- GlotzillaRandom()
: glotzwrappers::GlotzillaRandom
- GlotzillaSimulation()
: glotzwrappers::GlotzillaSimulation
- GlotzillaSpecies()
: glotzwrappers::GlotzillaSpecies
- GlotzillaSpeciesSpheresMono()
: glotzwrappers::GlotzillaSpeciesSpheresMono
- GlotzillaSpeciesSpheresPolymer()
: glotzwrappers::GlotzillaSpeciesSpheresPolymer
- GlotzillaTwelveSixLjPotential()
: glotzwrappers::GlotzillaTwelveSixLjPotential
- GlotzillaVector3D()
: glotzwrappers::GlotzillaVector3D
- GlotzillaVelocityVerletIntegrator()
: glotzwrappers::GlotzillaVelocityVerletIntegrator
- GlotzillaVerletCellForceMultiPotentialMaster()
: glotzwrappers::GlotzillaVerletCellForceMultiPotentialMaster
- GlotzillaVerletCellForceMultiShiftedPotentialMaster()
: glotzwrappers::GlotzillaVerletCellForceMultiShiftedPotentialMaster
- GlotzillaVerletCellForcePotentialMaster()
: glotzwrappers::GlotzillaVerletCellForcePotentialMaster
- GlotzillaVerletCellForceShiftedPotentialMaster()
: glotzwrappers::GlotzillaVerletCellForceShiftedPotentialMaster
- GlotzillaVerletForceMultiPotentialMaster()
: glotzwrappers::GlotzillaVerletForceMultiPotentialMaster
- GlotzillaVerletForceMultiShiftedPotentialMaster()
: glotzwrappers::GlotzillaVerletForceMultiShiftedPotentialMaster
- GlotzillaVerletForcePotentialMaster()
: glotzwrappers::GlotzillaVerletForcePotentialMaster
- GlotzillaVerletForceShiftedPotentialMaster()
: glotzwrappers::GlotzillaVerletForceShiftedPotentialMaster
- GlotzillaWCAPotential()
: glotzwrappers::GlotzillaWCAPotential
- glotzParticle
: glotzwrappers::GlotzillaMonatomicMolecule
- glotzPolymer
: glotzwrappers::GlotzillaPolymer
- glotzVec
: glotzwrappers::GlotzillaVector3D
- GlotzVisualizer()
: glotzmd::GlotzVisualizer
- GlutMaster()
: glotzopengl::GlutMaster
, glotzopengl::GlutWindow
- GlutWindow()
: glotzopengl::GlutWindow
- GlutWindow3d()
: glotzopengl::GlutWindow3d
- GlutWindowThreaded()
: glotzopengl::GlutWindowThreaded
- gMcSimulation
: glotztps::TpsPointers
- gMdSimulation
: glotztps::TpsPointers
- gNewTransitionPath
: glotztps::TpsModule< S, E >
, glotztps::TpsPointers
- gOldTransitionPath
: glotztps::TpsPointers
, glotztps::TpsModule< S, E >
- Good()
: glotzopt::CellList
- gOutputInterval
: glotztps::TpsModule< S, E >
- gParticle
: glotzmc::McSimulation
, glotzmc::McPointers
, glotzmd::Simulation
, glotzmc::McSimulation
, glotzmc::McPointers
- gParticlesAreHard
: glotzmc::McSimulation
, glotzmc::McPointers
- gPatchyBead
: glotzmc::McSimulation
, glotzmc::McPointers
, glotzmc::McSimulation
- gPathLength
: glotztps::TpsModule< S, E >
- gPathNumber
: glotztps::TpsPointers
, glotztps::TpsModule< S, E >
- gPathWeight
: glotztps::TpsModule< S, E >
- gPointers
: glotzmc::McSimulation
- gPotential
: glotzmd::Simulation
- gPotentialMap
: glotzmd::Simulation
- gPotentialRoutine
: glotzmc::McPointers
, glotzmc::McSimulation
, glotzmc::McPointers
- gRandomNumberGenerator
: glotztps::TpsModule< S, E >
, glotzmc::McSimulation
, glotzmc::McPointers
, glotztps::TpsPointers
, glotzmc::McPointers
- GRANULAR
: glotzlammps::Simulation
- gRigidBody
: glotzmd::Simulation
- GROUP
: glotzopengl::GlObject
- gSimulation
: glotzmd::BaseObject
, glotzmc::McPointers
, glotztps::TpsModule< S, E >
, glotzmc::McPointers
, glotztps::TpsTrialMove
, glotztps::TpsSimulationComponent
, glotzannealing::AnnealingModule
- gSimulationComponent
: glotzmc::McPointers
, glotzmc::McSimulation
, glotzmc::McPointers
- gSimulationModifier
: glotzmd::Simulation
- gSimulationType
: glotzsimapi::SimulationApi
- gSpring
: glotzmd::Simulation
- gThermalCycle
: glotzannealing::AnnealingModule
- gThermostat
: glotzannealing::AnnealingModule
- gTime
: glotzmc::McSimulation
, glotzmc::McPointers
- gTimestep
: glotzmd::Simulation
- gTimesteps
: glotzsimapi::SimulationApi
, glotzmc::McPointers
- gTps
: glotztps::TpsSimulationComponent
, glotztps::TpsPointers
- gTpsModule
: glotztps::TpsTrialMove
- gTrajectoriesAreStochastic
: glotztps::TpsModule< S, E >
- gTrialMove
: glotzmc::McPointers
, glotzmc::McSimulation
, glotztps::TpsModule< S, E >
, glotzmc::McPointers
- gUnits
: glotzmc::McSimulation
, glotzmc::McPointers
, glotzmd::Simulation
, glotzmc::McPointers
, glotzmc::McSimulation
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